MaxQuant.Live: Documentation

This is the user documentation of MaxQuant.Live, a software framework for real-time monitoring of mass spectrometric data and controlling of the data acquisition. MaxQuant.Live can be downloaded on http://maxquant.live

Publication:

MaxQuant.Live enables global targeting of more than 25,000 peptides Christoph Wichmann, Florian Meier, Sebastian Virreira Winter, Andreas-David Brunner, Juergen Cox, Matthias Mann doi: 1101/443838

Note

This user documentation is not fully complete yet and is frequently updated.

Overview

• User Interface
  • Instrument
  • Main Module
  • Scan Protocol Library
• Operation Modes
  • Setup Mode
  • Listening Mode
  • Running Mode

Usage

• Installation
  • Check requirements
  • Download and unpack
• Create and edit Scan Protocols
  • New scan protocol
  • Edit scan protocols
  • Copy and Delete
  • Storage and Compatibility
  • Run scan protocol
• Run Scan protocols
  • Manual startup
  • Automated startup

Apps

• BoxCar
  • Acquisition
  • Analysis
• Easitag and TopN
• Targeting
  • Steps to setup a targeting run
  • Peptide list
  • Setup of targeting actions
  • Global Parameters